BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026C02SP1|AL428511
(709 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1647 1346 0.0
>3x_Contig1647
Length = 14353
Score = 1346 bits (668), Expect = 0.0
Identities = 690/709 (97%)
Strand = Plus / Plus
Query: 1 aatccacacgatgtagttgatttatcggaagagttggtggagtatggacaaaagaattcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11476 aatccacacgatgtagttgatttatcggaagagttggtggagtatggacaaaagaattcc 11535
Query: 61 aaacggattggagataggatggaatggtgggaggatgaagtacatgcggkgtacaaagag 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 11536 aaacggattggagataggatggaatggtgggaggatgaagtacatgcggtgtacaaagag 11595
Query: 121 tggtacgaggcaacaagagaggagtcagargaggaggragaggaggragagggagargrg 180
||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||| | |
Sbjct: 11596 tggtacgaggcaacaagagaggagtcagaagaggaggaagaggaggaagagggagaagag 11655
Query: 181 ggagaagaggaggagaacgagaacgagtccccagcctccgactctgattcgacgtcctca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11656 ggagaagaggaggagaacgagaacgagtccccagcctccgactctgattcgacgtcctca 11715
Query: 241 gaactttcttcggaagaaaccccagaagaaaatgacgcctggggatacgtccacctaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11716 gaactttcttcggaagaaaccccagaagaaaatgacgcctggggatacgtccacctaaaa 11775
Query: 301 cactccggaaaamcgaatgawgtgctcctagctatcttgaacctactgacaawgtctcca 360
|||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct: 11776 cactccggaaaaccgaatgatgtgctcctagctatcttgaacctactgacaatgtctcca 11835
Query: 361 tcaatgtacaagaacctttcgagcgccagaggagatgtagagaaacttgccaagaaacta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11836 tcaatgtacaagaacctttcgagcgccagaggagatgtagagaaacttgccaagaaacta 11895
Query: 421 ccactgttggragccaaactatcaggcgacgggaaaaggttactgaracaaatatgtgct 480
|||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 11896 ccactgttggaagccaaactatcaggcgacgggaaaaggttactgaaacaaatatgtgct 11955
Query: 481 gncaagaagtaagcaaaactgccgtcagaccttaaracttacaamttgcaacaaatagaa 540
| ||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 11956 gccaagaagtacgcaaaactgccgtcagaccttaaaacttacaacttgcaacaaatagaa 12015
Query: 541 ttactgataaactctgagaagcagatcctaaatcgagtcaggtaggrtagctgcatccga 600
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 12016 ttactgataaactctgagaagcagatcctaaatcgagtcaggtaggatagctgcatccga 12075
Query: 601 gcatatatacacatgaatatwaacgtatatccacacaattwatcacgtgactagaaccaa 660
|||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 12076 gcatatatacacatgaatataaacgtatatccacacaattaatcacgtgactagaaccaa 12135
Query: 661 ccctcatcccgtacacaatgacccatatcgcaaaaraaaaatttctttc 709
||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 12136 ccctcatcccgtacacaatgacccatatcgcaaaagaaaaatttctttc 12184
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.32
Gapped
Lambda K H
1.40 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3156
Number of Sequences: 1807
Number of extensions: 3156
Number of successful extensions: 84
Number of sequences better than 1.0e-20: 1
length of query: 709
length of database: 10,358,551
effective HSP length: 16
effective length of query: 693
effective length of database: 10,329,639
effective search space: 7158439827
effective search space used: 7158439827
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 49 (99.2 bits)